A comprehensive List of Journals with Impact Factors developed by the Insitute of Transportation and Logistics Studies can be found here
Popular Journals where researchers can publish freight planning and logistics research:
Transportation Research Record
Transportation Research Part E: Logistics and Transportation Review
Transportation Science
Transportation Research Part A: Policy and Practice
EURO Journal on Transportation and Logistics
Transport Geography
International Journal of Logistics Management
International Journal of Physical Distribution and Logistics Management
Transport Policy
Transportation
ASCE Journal of Transportation Engineering Part A: Systems
Transportmetrica A: Transport Science
Transportation Letters